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  5. Zm00001d002865_T002

Zm00001d002865_T002


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0003486 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003486_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d002865_T002
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d002865_T002
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_104
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_125


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001680 WD40_rpt ProSiteProfiles 465 507
IPR001680 WD40_rpt SMART 308 347
IPR001680 WD40_rpt SMART 740 777
IPR001680 WD40_rpt SMART 555 591
IPR001680 WD40_rpt SMART 592 633
IPR001680 WD40_rpt SMART 418 456
IPR001680 WD40_rpt SMART 459 498
IPR001680 WD40_rpt SMART 500 539
IPR020472 G-protein_beta_WD-40_rep PRINTS 443 457
IPR020472 G-protein_beta_WD-40_rep PRINTS 485 499
IPR020472 G-protein_beta_WD-40_rep PRINTS 334 348
IPR001680 WD40_rpt ProSiteProfiles 425 465
IPR040324 WDR44/Dgr2 PANTHER 13 784
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 214 400
IPR001680 WD40_rpt Pfam 420 455
IPR001680 WD40_rpt Pfam 597 632
IPR001680 WD40_rpt Pfam 314 346
IPR001680 WD40_rpt Pfam 461 498
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 402 682
IPR001680 WD40_rpt ProSiteProfiles 315 356
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 313 641
IPR019775 WD40_repeat_CS ProSitePatterns 334 348
IPR020472 G-protein_beta_WD-40_rep PRINTS 443 457
IPR020472 G-protein_beta_WD-40_rep PRINTS 485 499
IPR020472 G-protein_beta_WD-40_rep PRINTS 334 348
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 402 682
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 214 400
IPR001680 WD40_rpt SMART 308 347
IPR001680 WD40_rpt SMART 740 777
IPR001680 WD40_rpt SMART 555 591
IPR001680 WD40_rpt SMART 592 633
IPR001680 WD40_rpt SMART 418 456
IPR001680 WD40_rpt SMART 459 498
IPR001680 WD40_rpt SMART 500 539
IPR001680 WD40_rpt ProSiteProfiles 465 507
IPR001680 WD40_rpt Pfam 315 346
IPR001680 WD40_rpt Pfam 420 455
IPR001680 WD40_rpt Pfam 594 632
IPR001680 WD40_rpt Pfam 461 498
IPR001680 WD40_rpt ProSiteProfiles 315 356
IPR019775 WD40_repeat_CS ProSitePatterns 334 348
IPR040324 WDR44/Dgr2 PANTHER 5 785
IPR001680 WD40_rpt ProSiteProfiles 425 465
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 313 641

No CAZYmes available for this sequence

No external refs found!