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  5. Zm00001d002919_T001

Zm00001d002919_T001


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0007364 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007364_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d002919_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d002919_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_81
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_255


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 184 295
IPR019734 TPR_repeat SMART 185 218
IPR019734 TPR_repeat SMART 253 287
IPR019734 TPR_repeat SMART 219 252
IPR001440 TPR_1 Pfam 220 252
IPR019734 TPR_repeat ProSiteProfiles 185 218
IPR011990 TPR-like_helical_dom_sf Gene3D 182 327
IPR047150 SGT PANTHER 4 473
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 184 295
IPR001440 TPR_1 Pfam 220 252
IPR011990 TPR-like_helical_dom_sf Gene3D 182 327
IPR019734 TPR_repeat ProSiteProfiles 185 218
IPR019734 TPR_repeat SMART 185 218
IPR019734 TPR_repeat SMART 253 287
IPR019734 TPR_repeat SMART 219 252

No CAZYmes available for this sequence

No external refs found!