Zm00001d003128_T001

Description : BED zinc finger ;hAT family dimerisation domain

Gene families : OG_01_0000195 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000195_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d003128_T001	No neighbors in network
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d003128_T001
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_5

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0046983	protein dimerization activity	ISM	GOs from InterProScan
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR012337	RNaseH-like_sf	SUPERFAMILY	162	628
IPR003656	Znf_BED	ProSiteProfiles	24	81
IPR025525	hAT-like_transposase_RNase-H	Pfam	394	496
IPR008906	HATC_C_dom	Pfam	546	628
IPR003656	Znf_BED	Pfam	28	75
IPR045259	DAYSLEEPER-like	PANTHER	14	634
IPR003656	Znf_BED	Pfam	28	75
IPR012337	RNaseH-like_sf	SUPERFAMILY	162	628
IPR003656	Znf_BED	ProSiteProfiles	24	81
IPR008906	HATC_C_dom	Pfam	546	628
IPR025525	hAT-like_transposase_RNase-H	Pfam	393	496

No CAZYmes available for this sequence

External Links

No external refs found!