Zm00001d003247_T002

Description : malate synthase

Gene families : OG_01_0012267 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012267_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d003247_T002
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d003247_T002
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_283
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_97

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	ISM	GOs from InterProScan
MF	GO:0004474	malate synthase activity	ISM	GOs from InterProScan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0006081	cellular aldehyde metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006097	glyoxylate cycle	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046487	glyoxylate metabolic process	None	Extended
MF	GO:0046912	acyltransferase activity, acyl groups converted into alkyl on transfer	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR006252	Malate_synthA	CDD	29	548
IPR006252	Malate_synthA	PANTHER	11	551
IPR001465	Malate_synthase_TIM	Pfam	169	419
IPR048355	MS_C	Pfam	425	547
IPR006252	Malate_synthA	PIRSF	8	549
IPR046363	MS_N_TIM-barrel_dom	Gene3D	12	423
IPR048356	MS_N	Pfam	14	76
IPR044856	Malate_synth_C_sf	Gene3D	424	548
IPR006252	Malate_synthA	NCBIfam	29	547
IPR011076	Malate_synth_sf	SUPERFAMILY	12	550
IPR019830	Malate_synthase_CS	ProSitePatterns	276	291
IPR011076	Malate_synth_sf	SUPERFAMILY	12	550
IPR019830	Malate_synthase_CS	ProSitePatterns	276	291
IPR044856	Malate_synth_C_sf	Gene3D	424	548
IPR006252	Malate_synthA	TIGRFAM	29	547
IPR006252	Malate_synthA	PIRSF	8	549
IPR006252	Malate_synthA	PANTHER	9	553
IPR001465	Malate_synthase_TIM	Pfam	17	548
IPR006252	Malate_synthA	CDD	29	548

No CAZYmes available for this sequence

External Links

No external refs found!