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  5. Zm00001d003284_T001

Zm00001d003284_T001


Description : SWITCH/sucrose nonfermenting 3A


Gene families : OG_01_0008970 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008970_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d003284_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d003284_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_293
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_272


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001005 SANT/Myb Pfam 267 303
IPR008833 Surf2 Pfam 567 636
IPR009057 Homeobox-like_sf SUPERFAMILY 263 304
IPR001005 SANT/Myb SMART 264 312
IPR001005 SANT/Myb ProSiteProfiles 260 302
IPR007526 SWIRM Pfam 34 118
IPR007526 SWIRM ProSiteProfiles 24 127
IPR001005 SANT/Myb CDD 267 303
IPR036388 WH-like_DNA-bd_sf Gene3D 30 122
IPR009057 Homeobox-like_sf SUPERFAMILY 23 125
IPR032451 SMARCC_C Pfam 483 550
IPR017884 SANT_dom ProSiteProfiles 263 314
IPR008833 Surf2 Pfam 567 636
IPR007526 SWIRM ProSiteProfiles 24 127
IPR017930 Myb_dom Pfam 266 303
IPR032451 SMARCC_C Pfam 483 549
IPR001005 SANT/Myb CDD 267 303
IPR009057 Homeobox-like_sf SUPERFAMILY 263 304
IPR017884 SANT_dom ProSiteProfiles 263 314
IPR001005 SANT/Myb SMART 264 312
IPR036388 WH-like_DNA-bd_sf Gene3D 30 122
IPR009057 Homeobox-like_sf SUPERFAMILY 23 125
IPR001005 SANT/Myb ProSiteProfiles 260 302
IPR007526 SWIRM Pfam 27 118

No CAZYmes available for this sequence

No external refs found!