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Description : C2H2-like zinc finger protein
Gene families : OG_01_0045745 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0045745_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d003335_T001 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_154 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR013087 | Znf_C2H2_type | ProSitePatterns | 59 | 79 |
| IPR013087 | Znf_C2H2_type | Pfam | 417 | 441 |
| IPR013087 | Znf_C2H2_type | Pfam | 57 | 81 |
| IPR013087 | Znf_C2H2_type | Pfam | 318 | 340 |
| IPR036236 | Znf_C2H2_sf | SUPERFAMILY | 415 | 441 |
| IPR013087 | Znf_C2H2_type | ProSitePatterns | 320 | 340 |
| IPR036236 | Znf_C2H2_sf | SUPERFAMILY | 58 | 340 |
| IPR013087 | Znf_C2H2_type | ProSiteProfiles | 318 | 345 |
| IPR013087 | Znf_C2H2_type | ProSitePatterns | 419 | 439 |
| IPR013087 | Znf_C2H2_type | ProSiteProfiles | 417 | 444 |
| IPR044653 | AZF1/2/3-like | PANTHER | 55 | 474 |
| IPR013087 | Znf_C2H2_type | SMART | 318 | 340 |
| IPR013087 | Znf_C2H2_type | SMART | 417 | 439 |
| IPR013087 | Znf_C2H2_type | SMART | 57 | 79 |
| IPR013087 | Znf_C2H2_type | ProSitePatterns | 320 | 340 |
| IPR013087 | Znf_C2H2_type | ProSitePatterns | 59 | 79 |
| IPR036236 | Znf_C2H2_sf | SUPERFAMILY | 415 | 441 |
| IPR036236 | Znf_C2H2_sf | SUPERFAMILY | 58 | 340 |
| IPR013087 | Znf_C2H2_type | ProSitePatterns | 419 | 439 |
| IPR013087 | Znf_C2H2_type | ProSiteProfiles | 318 | 345 |
| IPR013087 | Znf_C2H2_type | SMART | 318 | 340 |
| IPR013087 | Znf_C2H2_type | SMART | 417 | 439 |
| IPR013087 | Znf_C2H2_type | SMART | 57 | 79 |
| IPR044653 | AZF1/2/3-like | PANTHER | 2 | 483 |
| IPR013087 | Znf_C2H2_type | ProSiteProfiles | 417 | 444 |
No CAZYmes available for this sequence
| No external refs found! |