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Description : lipoxygenase 3
Gene families : OG_01_0003664 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003664_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d003533_T001 | |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d003533_T001 | |
| Cluster | Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_196 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_106 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| MF | GO:0016491 | oxidoreductase activity | ISM | GOs from InterProScan |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | ISM | GOs from InterProScan |
| MF | GO:0046872 | metal ion binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR013819 | LipOase_C | ProSiteProfiles | 223 | 941 |
| IPR001024 | PLAT/LH2_dom | ProSiteProfiles | 98 | 220 |
| IPR001024 | PLAT/LH2_dom | Pfam | 156 | 219 |
| IPR042057 | Lipoxy_PLAT/LH2 | CDD | 95 | 221 |
| IPR001246 | LipOase_plant | PRINTS | 257 | 273 |
| IPR001246 | LipOase_plant | PRINTS | 532 | 556 |
| IPR001246 | LipOase_plant | PRINTS | 216 | 237 |
| IPR001246 | LipOase_plant | PRINTS | 364 | 385 |
| IPR001246 | LipOase_plant | PRINTS | 290 | 309 |
| IPR001246 | LipOase_plant | PRINTS | 190 | 208 |
| IPR001246 | LipOase_plant | PRINTS | 854 | 868 |
| IPR001024 | PLAT/LH2_dom | SMART | 82 | 221 |
| IPR020833 | LipOase_Fe_BS | ProSitePatterns | 596 | 610 |
| IPR020834 | LipOase_CS | ProSitePatterns | 623 | 633 |
| IPR000907 | LipOase | PANTHER | 110 | 941 |
| IPR036226 | LipOase_C_sf | SUPERFAMILY | 225 | 941 |
| IPR013819 | LipOase_C | Pfam | 232 | 924 |
| IPR013819 | LipOase_C | PRINTS | 596 | 613 |
| IPR013819 | LipOase_C | PRINTS | 578 | 595 |
| IPR013819 | LipOase_C | PRINTS | 616 | 636 |
| IPR036392 | PLAT/LH2_dom_sf | SUPERFAMILY | 83 | 224 |
| IPR027433 | Lipoxygenase_dom_3 | Gene3D | 336 | 421 |
| IPR001024 | PLAT/LH2_dom | Pfam | 157 | 219 |
| IPR013819 | LipOase_C | PRINTS | 596 | 613 |
| IPR013819 | LipOase_C | PRINTS | 578 | 595 |
| IPR013819 | LipOase_C | PRINTS | 616 | 636 |
| IPR036392 | PLAT/LH2_dom_sf | SUPERFAMILY | 83 | 224 |
| IPR020833 | LipOase_Fe_BS | ProSitePatterns | 596 | 610 |
| IPR013819 | LipOase_C | ProSiteProfiles | 223 | 941 |
| IPR036226 | LipOase_C_sf | SUPERFAMILY | 225 | 941 |
| IPR001246 | LipOase_plant | PRINTS | 257 | 273 |
| IPR001246 | LipOase_plant | PRINTS | 532 | 556 |
| IPR001246 | LipOase_plant | PRINTS | 216 | 237 |
| IPR001246 | LipOase_plant | PRINTS | 364 | 385 |
| IPR001246 | LipOase_plant | PRINTS | 290 | 309 |
| IPR001246 | LipOase_plant | PRINTS | 190 | 208 |
| IPR001246 | LipOase_plant | PRINTS | 854 | 868 |
| IPR000907 | LipOase | PANTHER | 42 | 939 |
| IPR013819 | LipOase_C | Pfam | 232 | 924 |
| IPR042057 | Lipoxy_PLAT/LH2 | CDD | 95 | 221 |
| IPR027433 | Lipoxygenase_dom_3 | Gene3D | 336 | 421 |
| IPR001024 | PLAT/LH2_dom | SMART | 82 | 221 |
| IPR020834 | LipOase_CS | ProSitePatterns | 623 | 633 |
| IPR001024 | PLAT/LH2_dom | ProSiteProfiles | 98 | 220 |
No CAZYmes available for this sequence
| No external refs found! |