Zm00001d003624_T001

Description : plant U-box 25

Gene families : OG_01_0011364 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011364_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d003624_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d003624_T001	No neighbors in network
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_169

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	ISM	GOs from InterProScan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016755	aminoacyltransferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	ISM	GOs from InterProScan
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR003613	Ubox_domain	ProSiteProfiles	2	76
IPR011989	ARM-like	Gene3D	300	384
IPR003613	Ubox_domain	Pfam	3	72
IPR016024	ARM-type_fold	SUPERFAMILY	229	381
IPR045185	PUB22/23/24-like	PANTHER	2	398
IPR045210	RING-Ubox_PUB	CDD	4	56
IPR013083	Znf_RING/FYVE/PHD	Gene3D	2	77
IPR003613	Ubox_domain	SMART	6	69
IPR011989	ARM-like	Gene3D	83	299
IPR016024	ARM-type_fold	SUPERFAMILY	229	381
IPR003613	Ubox_domain	SMART	6	69
IPR003613	Ubox_domain	Pfam	3	72
IPR045210	RING-Ubox_PUB	CDD	7	49
IPR013083	Znf_RING/FYVE/PHD	Gene3D	2	77
IPR045185	PUB22/23/24-like	PANTHER	1	400
IPR011989	ARM-like	Gene3D	83	299
IPR011989	ARM-like	Gene3D	300	384
IPR003613	Ubox_domain	ProSiteProfiles	2	76

No CAZYmes available for this sequence

External Links

No external refs found!