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  5. Zm00001d003776_T001

Zm00001d003776_T001


Description : cell wall invertase 2


Gene families : OG_01_0000276 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000276_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d003776_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d003776_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_102
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_121


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR023296 Glyco_hydro_beta-prop_sf Gene3D 1 322
IPR013148 Glyco_hydro_32_N Pfam 1 310
IPR013189 Glyco_hydro_32_C Pfam 313 512
IPR013320 ConA-like_dom_sf SUPERFAMILY 310 515
IPR001362 Glyco_hydro_32 SMART 1 473
IPR023296 Glyco_hydro_beta-prop_sf SUPERFAMILY 1 311
IPR013189 Glyco_hydro_32_C Pfam 313 512
IPR013320 ConA-like_dom_sf SUPERFAMILY 310 515
IPR013148 Glyco_hydro_32_N Pfam 1 310
IPR023296 Glyco_hydro_beta-prop_sf Gene3D 1 322
IPR023296 Glyco_hydro_beta-prop_sf SUPERFAMILY 1 311
IPR001362 Glyco_hydro_32 SMART 1 473
HMM Family HMM Length Query Length e-Value Query Start Query End
GH32 293 522 4e-76 1 310
No external refs found!