1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001d004025_T001

Zm00001d004025_T001


Description : DnaJ domain ;Myb-like DNA-binding domain


Gene families : OG_01_0003814 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003814_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d004025_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d004025_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_11
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_239


Type GO Term Name Evidence Source
BP GO:0006450 regulation of translational fidelity ISM GOs from InterProScan
MF GO:0030544 Hsp70 protein binding ISM GOs from InterProScan
MF GO:0043022 ribosome binding ISM GOs from InterProScan
BP GO:0051083 'de novo' cotranslational protein folding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001005 SANT/Myb CDD 596 638
IPR001623 DnaJ_domain PRINTS 120 135
IPR001623 DnaJ_domain PRINTS 151 171
IPR001623 DnaJ_domain PRINTS 102 120
IPR001623 DnaJ_domain ProSiteProfiles 97 179
IPR001005 SANT/Myb CDD 471 511
IPR001005 SANT/Myb SMART 593 645
IPR001005 SANT/Myb SMART 468 521
IPR001623 DnaJ_domain SMART 96 171
IPR036869 J_dom_sf Gene3D 79 189
IPR036869 J_dom_sf SUPERFAMILY 85 175
IPR009057 Homeobox-like_sf SUPERFAMILY 595 648
IPR009057 Homeobox-like_sf SUPERFAMILY 466 512
IPR001623 DnaJ_domain Pfam 97 176
IPR018253 DnaJ_domain_CS ProSitePatterns 156 175
IPR001623 DnaJ_domain CDD 97 168
IPR001005 SANT/Myb ProSiteProfiles 464 519
IPR044634 Zuotin/DnaJC2 PANTHER 1 650
IPR001005 SANT/Myb CDD 471 511
IPR001005 SANT/Myb CDD 596 638
IPR001005 SANT/Myb ProSiteProfiles 464 519
IPR001005 SANT/Myb SMART 593 645
IPR001005 SANT/Myb SMART 468 521
IPR001623 DnaJ_domain PRINTS 120 135
IPR001623 DnaJ_domain PRINTS 151 171
IPR001623 DnaJ_domain PRINTS 102 120
IPR001623 DnaJ_domain Pfam 97 176
IPR001623 DnaJ_domain CDD 97 168
IPR001623 DnaJ_domain SMART 96 171
IPR009057 Homeobox-like_sf SUPERFAMILY 595 648
IPR044634 Zuotin/DnaJC2 PANTHER 1 651
IPR036869 J_dom_sf Gene3D 79 189
IPR018253 DnaJ_domain_CS ProSitePatterns 156 175
IPR036869 J_dom_sf SUPERFAMILY 85 175
IPR009057 Homeobox-like_sf SUPERFAMILY 466 512
IPR001623 DnaJ_domain ProSiteProfiles 97 179

No CAZYmes available for this sequence

No external refs found!