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  5. Zm00001d004215_T002

Zm00001d004215_T002


Description : Transducin family protein / WD-40 repeat family protein


Gene families : OG_01_0005168 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005168_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d004215_T002
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d004215_T002
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_145
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_58


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR019775 WD40_repeat_CS ProSitePatterns 202 216
IPR001680 WD40_rpt ProSiteProfiles 182 224
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 147 293
IPR001680 WD40_rpt Pfam 176 215
IPR001680 WD40_rpt Pfam 149 170
IPR001680 WD40_rpt SMART 175 215
IPR001680 WD40_rpt SMART 218 255
IPR001680 WD40_rpt SMART 134 172
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 55 316
IPR001680 WD40_rpt SMART 218 255
IPR001680 WD40_rpt SMART 175 215
IPR001680 WD40_rpt SMART 134 172
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 147 293
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 55 316
IPR001680 WD40_rpt ProSiteProfiles 182 224
IPR019775 WD40_repeat_CS ProSitePatterns 202 216
IPR001680 WD40_rpt Pfam 176 215

No CAZYmes available for this sequence

No external refs found!