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  5. Zm00001d004372_T003

Zm00001d004372_T003


Description : Signal transduction histidine kinase, hybrid-type, ethylene sensor


Gene families : OG_01_0009449 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009449_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d004372_T003
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d004372_T003
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_257
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_202


Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity ISM GOs from InterProScan
BP GO:0000160 phosphorelay signal transduction system ISM GOs from InterProScan
MF GO:0004672 protein kinase activity ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
CC GO:0005789 endoplasmic reticulum membrane ISM GOs from InterProScan
BP GO:0007165 signal transduction ISM GOs from InterProScan
BP GO:0009723 response to ethylene ISM GOs from InterProScan
MF GO:0038199 ethylene receptor activity ISM GOs from InterProScan
MF GO:0051740 ethylene binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001789 Sig_transdc_resp-reg_receiver Pfam 650 759
IPR001789 Sig_transdc_resp-reg_receiver SMART 648 763
IPR003018 GAF SMART 195 353
IPR011006 CheY-like_superfamily SUPERFAMILY 644 768
IPR003018 GAF Pfam 195 343
IPR036097 HisK_dim/P_sf SUPERFAMILY 364 442
IPR036890 HATPase_C_sf Gene3D 445 624
IPR014525 ETR PIRSF 11 770
IPR029016 GAF-like_dom_sf Gene3D 174 344
IPR001789 Sig_transdc_resp-reg_receiver ProSiteProfiles 649 767
IPR036890 HATPase_C_sf Gene3D 445 624
IPR014525 ETR PIRSF 11 770
IPR001789 Sig_transdc_resp-reg_receiver SMART 648 763
IPR029016 GAF-like_dom_sf Gene3D 174 344
IPR003018 GAF Pfam 195 343
IPR001789 Sig_transdc_resp-reg_receiver ProSiteProfiles 649 767
IPR001789 Sig_transdc_resp-reg_receiver Pfam 650 759
IPR036097 HisK_dim/P_sf SUPERFAMILY 364 442
IPR011006 CheY-like_superfamily SUPERFAMILY 644 768
IPR003018 GAF SMART 195 353

No CAZYmes available for this sequence

No external refs found!