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  5. Zm00001d004471_T001

Zm00001d004471_T001


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0010829 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010829_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d004471_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d004471_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_45
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_153


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 69 103
IPR002885 Pentatricopeptide_rpt Pfam 69 115
IPR045215 PPR_prot_At1g15510 PANTHER 6 117
IPR002885 Pentatricopeptide_rpt Pfam 41 63
IPR011990 TPR-like_helical_dom_sf Gene3D 1 153
IPR002885 Pentatricopeptide_rpt NCBIfam 71 102
IPR011990 TPR-like_helical_dom_sf Gene3D 1 153
IPR002885 Pentatricopeptide_rpt TIGRFAM 71 102
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 69 103
IPR002885 Pentatricopeptide_rpt Pfam 71 101
IPR002885 Pentatricopeptide_rpt Pfam 41 63

No CAZYmes available for this sequence

No external refs found!