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  5. Zm00001d004894_T001

Zm00001d004894_T001


Description : Ribulose bisphosphate carboxylase (small chain) family protein


Gene families : OG_01_0003671 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003671_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d004894_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d004894_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_239
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_92


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR024681 RuBisCO_ssu PANTHER 6 167
IPR024680 RuBisCO_ssu_N Pfam 9 33
IPR036385 RuBisCO_ssu_sf Gene3D 48 170
IPR000894 RuBisCO_ssu_dom CDD 57 166
IPR036385 RuBisCO_ssu_sf SUPERFAMILY 48 168
IPR000894 RuBisCO_ssu_dom Hamap 57 167
IPR000894 RuBisCO_ssu_dom SMART 58 166
IPR000894 RuBisCO_ssu_dom Pfam 59 166
IPR024681 RuBisCO_ssu PRINTS 140 166
IPR024681 RuBisCO_ssu PRINTS 106 135
IPR024681 RuBisCO_ssu PRINTS 36 54
IPR024681 RuBisCO_ssu PRINTS 57 83
IPR024681 RuBisCO_ssu PRINTS 10 27
IPR024681 RuBisCO_ssu PRINTS 85 100
IPR000894 RuBisCO_ssu_dom CDD 57 166
IPR024681 RuBisCO_ssu PANTHER 1 169
IPR036385 RuBisCO_ssu_sf Gene3D 48 170
IPR024681 RuBisCO_ssu PRINTS 140 166
IPR024681 RuBisCO_ssu PRINTS 106 135
IPR024681 RuBisCO_ssu PRINTS 36 54
IPR024681 RuBisCO_ssu PRINTS 57 83
IPR024681 RuBisCO_ssu PRINTS 10 27
IPR024681 RuBisCO_ssu PRINTS 85 100
IPR000894 RuBisCO_ssu_dom Pfam 59 166
IPR024680 RuBisCO_ssu_N Pfam 9 33
IPR036385 RuBisCO_ssu_sf SUPERFAMILY 48 168
IPR000894 RuBisCO_ssu_dom SMART 58 166

No CAZYmes available for this sequence

No external refs found!