Zm00001d004960_T002

Description : 2-isopropylmalate synthase 1

Gene families : OG_01_0001292 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001292_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d004960_T002
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d004960_T002
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_64
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_235

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	ISM	GOs from InterProScan
MF	GO:0003852	2-isopropylmalate synthase activity	ISM	GOs from InterProScan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006551	leucine metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008652	amino acid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009081	branched-chain amino acid metabolic process	None	Extended
BP	GO:0009082	branched-chain amino acid biosynthetic process	None	Extended
BP	GO:0009098	leucine biosynthetic process	ISM	GOs from InterProScan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	ISM	GOs from InterProScan
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
MF	GO:0046912	acyltransferase activity, acyl groups converted into alkyl on transfer	ISM	GOs from InterProScan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000891	PYR_CT	ProSiteProfiles	273	548
IPR013709	2-isopropylmalate_synth_dimer	SMART	659	804
IPR036230	LeuA_allosteric_dom_sf	SUPERFAMILY	688	803
IPR036230	LeuA_allosteric_dom_sf	Gene3D	683	804
IPR002034	AIPM/Hcit_synth_CS	ProSitePatterns	280	296
IPR013785	Aldolase_TIM	Gene3D	267	558
IPR013709	2-isopropylmalate_synth_dimer	Pfam	659	803
IPR000891	PYR_CT	Pfam	273	554
IPR005671	LeuA_bact_synth	NCBIfam	273	801
IPR000891	PYR_CT	Pfam	273	554
IPR036230	LeuA_allosteric_dom_sf	SUPERFAMILY	688	803
IPR002034	AIPM/Hcit_synth_CS	ProSitePatterns	280	296
IPR005671	LeuA_bact_synth	TIGRFAM	273	801
IPR013709	2-isopropylmalate_synth_dimer	SMART	659	804
IPR013785	Aldolase_TIM	Gene3D	267	558
IPR036230	LeuA_allosteric_dom_sf	Gene3D	683	804
IPR013709	2-isopropylmalate_synth_dimer	Pfam	660	803
IPR000891	PYR_CT	ProSiteProfiles	273	548

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d004960_T002

Expression Profile

Co-expression Networks

Functional Annotation