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  5. Zm00001d005156_T001

Zm00001d005156_T001


Description : zinc finger (Ran-binding) family protein


Gene families : OG_01_0006644 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006644_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d005156_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d005156_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_165
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_24


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR043502 DNA/RNA_pol_sf SUPERFAMILY 1217 1374
IPR001876 Znf_RanBP2 SMART 384 408
IPR001876 Znf_RanBP2 SMART 417 441
IPR036443 Znf_RanBP2_sf SUPERFAMILY 375 411
IPR036691 Endo/exonu/phosph_ase_sf SUPERFAMILY 853 1000
IPR000477 RT_dom Pfam 1286 1371
IPR001876 Znf_RanBP2 Pfam 416 443
IPR001876 Znf_RanBP2 Pfam 382 410
IPR001876 Znf_RanBP2 ProSiteProfiles 382 411
IPR036691 Endo/exonu/phosph_ase_sf Gene3D 855 999
IPR001876 Znf_RanBP2 ProSitePatterns 419 438
IPR001876 Znf_RanBP2 ProSiteProfiles 415 444
IPR001876 Znf_RanBP2 ProSitePatterns 386 405
IPR000477 RT_dom Pfam 1285 1371
IPR036691 Endo/exonu/phosph_ase_sf Gene3D 855 999
IPR036691 Endo/exonu/phosph_ase_sf SUPERFAMILY 853 1000
IPR001876 Znf_RanBP2 SMART 384 408
IPR001876 Znf_RanBP2 SMART 417 441
IPR036443 Znf_RanBP2_sf SUPERFAMILY 375 411
IPR001876 Znf_RanBP2 ProSiteProfiles 382 411
IPR001876 Znf_RanBP2 Pfam 382 410
IPR001876 Znf_RanBP2 Pfam 416 443
IPR001876 Znf_RanBP2 ProSiteProfiles 415 444
IPR001876 Znf_RanBP2 ProSitePatterns 386 405
IPR001876 Znf_RanBP2 ProSitePatterns 419 438
IPR043502 DNA/RNA_pol_sf SUPERFAMILY 1217 1374

No CAZYmes available for this sequence

No external refs found!