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  5. Zm00001d005168_T003

Zm00001d005168_T003


Description : poly(ADP-ribose) polymerase 2


Gene families : OG_01_0006294 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006294_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d005168_T003
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d005168_T003
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_250
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_105


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISM GOs from InterProScan
MF GO:0003950 NAD+ ADP-ribosyltransferase activity ISM GOs from InterProScan
CC GO:0005634 nucleus ISM GOs from InterProScan
BP GO:0006471 obsolete protein ADP-ribosylation ISM GOs from InterProScan
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
MF GO:0051287 NAD binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001510 Znf_PARP ProSiteProfiles 8 91
IPR012317 Poly(ADP-ribose)pol_cat_dom Pfam 775 976
IPR004102 Poly(ADP-ribose)pol_reg_dom Pfam 630 761
IPR012317 Poly(ADP-ribose)pol_cat_dom ProSiteProfiles 755 980
IPR008893 WGR_domain Pfam 518 594
IPR008893 WGR_domain SMART 518 601
IPR008893 WGR_domain ProSiteProfiles 507 607
IPR001510 Znf_PARP ProSiteProfiles 104 176
IPR003034 SAP_dom ProSiteProfiles 257 291
IPR012982 PARP1-like_PADR1_Zn_ribbon Pfam 295 334
IPR036420 BRCT_dom_sf SUPERFAMILY 388 476
IPR008288 PARP PIRSF 1 980
IPR038650 PADR1_C_dom_sf Gene3D 295 356
IPR036420 BRCT_dom_sf Gene3D 383 483
IPR036616 Poly(ADP-ribose)pol_reg_dom_sf Gene3D 620 764
IPR036930 WGR_dom_sf SUPERFAMILY 487 611
IPR036957 Znf_PARP_sf Gene3D 3 98
IPR036957 Znf_PARP_sf Gene3D 99 204
IPR004102 Poly(ADP-ribose)pol_reg_dom ProSiteProfiles 629 748
IPR001357 BRCT_dom Pfam 392 463
IPR001510 Znf_PARP Pfam 11 86
IPR001510 Znf_PARP Pfam 107 176
IPR001357 BRCT_dom ProSiteProfiles 385 476
IPR049296 PARP1-like_PADR1_N Pfam 238 294
IPR001357 BRCT_dom SMART 387 466
IPR036616 Poly(ADP-ribose)pol_reg_dom_sf SUPERFAMILY 629 764
IPR001510 Znf_PARP SMART 107 181
IPR001510 Znf_PARP SMART 11 88
IPR012317 Poly(ADP-ribose)pol_cat_dom Pfam 775 976
IPR036616 Poly(ADP-ribose)pol_reg_dom_sf Gene3D 620 764
IPR036420 BRCT_dom_sf Gene3D 383 483
IPR038650 PADR1_C_dom_sf Gene3D 295 356
IPR008288 PARP PIRSF 1 980
IPR001357 BRCT_dom ProSiteProfiles 385 476
IPR036957 Znf_PARP_sf Gene3D 3 98
IPR036957 Znf_PARP_sf Gene3D 99 204
IPR003034 SAP_dom ProSiteProfiles 257 291
IPR001357 BRCT_dom SMART 387 466
IPR001510 Znf_PARP SMART 107 181
IPR001510 Znf_PARP SMART 11 88
IPR001510 Znf_PARP ProSiteProfiles 8 91
IPR004102 Poly(ADP-ribose)pol_reg_dom ProSiteProfiles 629 748
IPR012982 PARP1-like_PADR1_Zn_ribbon SMART 283 336
IPR008893 WGR_domain Pfam 518 594
IPR008893 WGR_domain SMART 518 601
IPR036420 BRCT_dom_sf SUPERFAMILY 388 476
IPR036616 Poly(ADP-ribose)pol_reg_dom_sf SUPERFAMILY 629 764
IPR001510 Znf_PARP Pfam 11 87
IPR001510 Znf_PARP Pfam 107 177
IPR004102 Poly(ADP-ribose)pol_reg_dom Pfam 630 761
IPR001510 Znf_PARP ProSiteProfiles 104 176
IPR036930 WGR_dom_sf SUPERFAMILY 487 611
IPR012982 PARP1-like_PADR1_Zn_ribbon Pfam 284 334
IPR012317 Poly(ADP-ribose)pol_cat_dom ProSiteProfiles 755 980

No CAZYmes available for this sequence

No external refs found!