Zm00001d005301_T008

Description : DNA binding

Gene families : OG_01_0012134 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012134_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d005301_T008
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d005301_T008
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_94
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_179

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	GOs from InterProScan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR015943	WD40/YVTN_repeat-like_dom_sf	Gene3D	843	1169
IPR040092	TBRG1	PANTHER	215	1146
IPR036322	WD40_repeat_dom_sf	SUPERFAMILY	835	1156
IPR003889	FYrich_C	Pfam	69	135
IPR003889	FYrich_C	ProSiteProfiles	67	148
IPR003889	FYrich_C	ProSiteProfiles	67	148
IPR040092	TBRG1	PANTHER	1	213
IPR040092	TBRG1	PANTHER	210	1154
IPR003889	FYrich_C	Pfam	69	135
IPR015943	WD40/YVTN_repeat-like_dom_sf	Gene3D	843	1169
IPR036322	WD40_repeat_dom_sf	SUPERFAMILY	835	1156

No CAZYmes available for this sequence

External Links

No external refs found!