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  5. Zm00001d005459_T001

Zm00001d005459_T001


Description : Cytidine/deoxycytidylate deaminase family protein


Gene families : OG_01_0001279 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001279_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d005459_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d005459_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_127
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_76


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
MF GO:0016787 hydrolase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR016193 Cytidine_deaminase-like SUPERFAMILY 24 144
IPR002125 CMP_dCMP_dom Pfam 30 129
IPR002125 CMP_dCMP_dom ProSiteProfiles 29 143
IPR016192 APOBEC/CMP_deaminase_Zn-bd ProSitePatterns 81 118
IPR002125 CMP_dCMP_dom Pfam 30 129
IPR016192 APOBEC/CMP_deaminase_Zn-bd ProSitePatterns 81 118
IPR016193 Cytidine_deaminase-like SUPERFAMILY 24 144
IPR002125 CMP_dCMP_dom ProSiteProfiles 29 143

No CAZYmes available for this sequence

No external refs found!