Description : Plant invertase/pectin methylesterase inhibitor superfamily
Gene families : OG_01_0027464 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0027464_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d005792_T004 | No neighbors in network |
Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d005792_T004 | |
Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_62 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004857 | enzyme inhibitor activity | ISM | GOs from InterProScan |
MF | GO:0030599 | pectinesterase activity | ISM | GOs from InterProScan |
BP | GO:0042545 | cell wall modification | ISM | GOs from InterProScan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Source | Start | Stop |
---|---|---|---|---|
IPR000070 | Pectinesterase_cat | Pfam | 316 | 400 |
IPR006501 | Pectinesterase_inhib_dom | Pfam | 106 | 250 |
IPR035513 | Invertase/methylesterase_inhib | SUPERFAMILY | 106 | 253 |
IPR035513 | Invertase/methylesterase_inhib | Gene3D | 104 | 253 |
IPR006501 | Pectinesterase_inhib_dom | SMART | 103 | 250 |
IPR011050 | Pectin_lyase_fold/virulence | SUPERFAMILY | 314 | 399 |
IPR006501 | Pectinesterase_inhib_dom | NCBIfam | 99 | 252 |
IPR012334 | Pectin_lyas_fold | Gene3D | 310 | 408 |
IPR000070 | Pectinesterase_cat | Pfam | 316 | 400 |
IPR006501 | Pectinesterase_inhib_dom | TIGRFAM | 99 | 252 |
IPR006501 | Pectinesterase_inhib_dom | SMART | 103 | 250 |
IPR035513 | Invertase/methylesterase_inhib | SUPERFAMILY | 106 | 253 |
IPR006501 | Pectinesterase_inhib_dom | Pfam | 107 | 250 |
IPR012334 | Pectin_lyas_fold | Gene3D | 310 | 408 |
IPR011050 | Pectin_lyase_fold/virulence | SUPERFAMILY | 314 | 399 |
IPR035513 | Invertase/methylesterase_inhib | Gene3D | 104 | 253 |
No CAZYmes available for this sequence
No external refs found! |