1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001d005812_T002

Zm00001d005812_T002


Description : sterile alpha motif (SAM) domain-containing protein


Gene families : OG_01_0010175 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010175_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d005812_T002
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d005812_T002
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_124
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_235


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
MF GO:0005524 ATP binding ISM GOs from InterProScan
BP GO:0006457 protein folding ISM GOs from InterProScan
MF GO:0016887 ATP hydrolysis activity ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001660 SAM SMART 460 526
IPR013761 SAM/pointed_sf SUPERFAMILY 464 527
IPR020818 Chaperonin_GroES Pfam 964 1045
IPR001660 SAM Pfam 467 523
IPR013761 SAM/pointed_sf Gene3D 465 536
IPR020818 Chaperonin_GroES CDD 908 1046
IPR036866 RibonucZ/Hydroxyglut_hydro Gene3D 610 750
IPR037124 Chaperonin_GroES_sf Gene3D 902 962
IPR037124 Chaperonin_GroES_sf Gene3D 963 1047
IPR036866 RibonucZ/Hydroxyglut_hydro SUPERFAMILY 614 880
IPR011032 GroES-like_sf SUPERFAMILY 907 963
IPR020818 Chaperonin_GroES SMART 908 964
IPR020818 Chaperonin_GroES SMART 966 1046
IPR020818 Chaperonin_GroES PRINTS 909 924
IPR020818 Chaperonin_GroES PRINTS 1012 1024
IPR020818 Chaperonin_GroES PRINTS 977 998
IPR020818 Chaperonin_GroES PRINTS 1033 1046
IPR011032 GroES-like_sf SUPERFAMILY 964 1046
IPR001660 SAM ProSiteProfiles 463 526
IPR020818 Chaperonin_GroES Hamap 908 1047
IPR018369 Chaprnonin_Cpn10_CS ProSitePatterns 909 933
IPR013761 SAM/pointed_sf Gene3D 465 536
IPR020818 Chaperonin_GroES SMART 908 964
IPR020818 Chaperonin_GroES SMART 966 1046
IPR036866 RibonucZ/Hydroxyglut_hydro SUPERFAMILY 614 880
IPR011032 GroES-like_sf SUPERFAMILY 964 1046
IPR001660 SAM ProSiteProfiles 463 526
IPR013761 SAM/pointed_sf SUPERFAMILY 464 527
IPR020818 Chaperonin_GroES Hamap 908 1047
IPR036866 RibonucZ/Hydroxyglut_hydro Gene3D 610 750
IPR020818 Chaperonin_GroES PRINTS 909 924
IPR020818 Chaperonin_GroES PRINTS 1012 1024
IPR020818 Chaperonin_GroES PRINTS 977 998
IPR020818 Chaperonin_GroES PRINTS 1033 1046
IPR001660 SAM SMART 460 526
IPR001660 SAM Pfam 467 522
IPR020818 Chaperonin_GroES CDD 908 1046
IPR020818 Chaperonin_GroES Pfam 965 1045
IPR020818 Chaperonin_GroES Pfam 909 964
IPR018369 Chaprnonin_Cpn10_CS ProSitePatterns 909 933
IPR011032 GroES-like_sf SUPERFAMILY 907 963
IPR037124 Chaperonin_GroES_sf Gene3D 902 962
IPR037124 Chaperonin_GroES_sf Gene3D 963 1047

No CAZYmes available for this sequence

No external refs found!