Zm00001d005839_T001

Description : Sec1/munc18-like (SM) proteins superfamily

Gene families : OG_01_0001675 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001675_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d005839_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d005839_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_199
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_14

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	ISM	GOs from InterProScan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	ISM	GOs from InterProScan
CC	GO:0030117	membrane coat	ISM	GOs from InterProScan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR002553	Clathrin/coatomer_adapt-like_N	Pfam	392	478
IPR027482	Sec1-like_dom2	Gene3D	42	397
IPR001619	Sec1-like	Pfam	42	395
IPR016024	ARM-type_fold	SUPERFAMILY	395	478
IPR043127	Sec-1-like_dom3a	Gene3D	151	373
IPR036045	Sec1-like_sf	SUPERFAMILY	42	400
IPR001619	Sec1-like	PANTHER	42	401
IPR027482	Sec1-like_dom2	Gene3D	42	397
IPR043127	Sec-1-like_dom3a	Gene3D	151	373
IPR001619	Sec1-like	PANTHER	33	396
IPR016024	ARM-type_fold	SUPERFAMILY	395	478
IPR002553	Clathrin/coatomer_adapt-like_N	Pfam	396	478
IPR001619	Sec1-like	Pfam	42	396
IPR036045	Sec1-like_sf	SUPERFAMILY	42	400

No CAZYmes available for this sequence

External Links

No external refs found!