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  3. Zea mays
  4. Sequence
  5. Zm00001d006150_T001

Zm00001d006150_T001


Description : Basic helix-loop-helix (bHLH) DNA-binding family protein


Gene families : OG_01_0012674 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012674_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d006150_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d006150_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_20
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_233


Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISM GOs from InterProScan
BP GO:0006355 regulation of DNA-templated transcription ISM GOs from InterProScan
MF GO:0046983 protein dimerization activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011598 bHLH_dom SMART 129 178
IPR045084 AIB/MYC-like PANTHER 25 286
IPR036638 HLH_DNA-bd_sf Gene3D 122 187
IPR011598 bHLH_dom Pfam 127 173
IPR036638 HLH_DNA-bd_sf SUPERFAMILY 125 185
IPR011598 bHLH_dom ProSiteProfiles 123 172
IPR011598 bHLH_dom SMART 129 178
IPR045084 AIB/MYC-like PANTHER 1 286
IPR036638 HLH_DNA-bd_sf SUPERFAMILY 125 185
IPR011598 bHLH_dom Pfam 126 172
IPR036638 HLH_DNA-bd_sf Gene3D 122 187
IPR011598 bHLH_dom ProSiteProfiles 123 172

No CAZYmes available for this sequence

No external refs found!