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  5. Zm00001d006161_T001

Zm00001d006161_T001


Description : alpha-L-fucosidase 1


Gene families : OG_01_0008384 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008384_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d006161_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d006161_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_90
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_13


Type GO Term Name Evidence Source
MF GO:0004560 alpha-L-fucosidase activity ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR008979 Galactose-bd-like_sf SUPERFAMILY 345 465
IPR000933 Glyco_hydro_29 PANTHER 16 480
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 30 341
IPR000933 Glyco_hydro_29 SMART 33 408
IPR000933 Glyco_hydro_29 Pfam 74 339
IPR000933 Glyco_hydro_29 Pfam 74 339
IPR008979 Galactose-bd-like_sf SUPERFAMILY 345 465
IPR000933 Glyco_hydro_29 PANTHER 10 481
IPR000933 Glyco_hydro_29 SMART 33 408
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 30 341
HMM Family HMM Length Query Length e-Value Query Start Query End
GH29 346 486 1.1e-78 39 339
No external refs found!