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  5. Zm00001d006399_T001

Zm00001d006399_T001


Description : expansin A16


Gene families : OG_01_0052915 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0052915_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d006399_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d006399_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_556
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_84


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM GOs from InterProScan
BP GO:0009664 plant-type cell wall organization ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002963 Expansin PRINTS 176 197
IPR002963 Expansin PRINTS 81 95
IPR002963 Expansin PRINTS 241 257
IPR002963 Expansin PRINTS 164 176
IPR002963 Expansin PRINTS 212 233
IPR009009 RlpA-like_DPBB Pfam 86 155
IPR007117 Expansin_CBD Pfam 166 244
IPR036908 RlpA-like_sf Gene3D 33 161
IPR002963 Expansin PANTHER 27 255
IPR036908 RlpA-like_sf SUPERFAMILY 44 183
IPR007118 Expan_Lol_pI PRINTS 68 86
IPR007118 Expan_Lol_pI PRINTS 203 217
IPR007118 Expan_Lol_pI PRINTS 241 255
IPR007118 Expan_Lol_pI PRINTS 90 108
IPR007118 Expan_Lol_pI PRINTS 48 63
IPR007117 Expansin_CBD ProSiteProfiles 175 255
IPR036749 Expansin_CBD_sf Gene3D 165 259
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 69 165
IPR007112 Expansin/allergen_DPBB_dom SMART 86 155
IPR036749 Expansin_CBD_sf SUPERFAMILY 162 254
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 69 165
IPR007112 Expansin/allergen_DPBB_dom SMART 86 155
IPR009009 RlpA-like_DPBB Pfam 86 155
IPR007117 Expansin_CBD ProSiteProfiles 175 255
IPR007117 Expansin_CBD Pfam 166 244
IPR036908 RlpA-like_sf Gene3D 33 161
IPR036749 Expansin_CBD_sf SUPERFAMILY 162 254
IPR007118 Expan_Lol_pI PRINTS 68 86
IPR007118 Expan_Lol_pI PRINTS 203 217
IPR007118 Expan_Lol_pI PRINTS 241 255
IPR007118 Expan_Lol_pI PRINTS 90 108
IPR007118 Expan_Lol_pI PRINTS 48 63
IPR002963 Expansin PANTHER 7 259
IPR036749 Expansin_CBD_sf Gene3D 165 259
IPR036908 RlpA-like_sf SUPERFAMILY 44 183
IPR002963 Expansin PRINTS 176 197
IPR002963 Expansin PRINTS 81 95
IPR002963 Expansin PRINTS 241 257
IPR002963 Expansin PRINTS 164 176
IPR002963 Expansin PRINTS 212 233

No CAZYmes available for this sequence

No external refs found!