Zm00001d006420_T002

Description : Leucine-rich repeat transmembrane protein kinase

Gene families : OG_01_0013312 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013312_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d006420_T002
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d006420_T002
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_7
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_97

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR032675	LRR_dom_sf	Gene3D	261	336
IPR001611	Leu-rich_rpt	Pfam	169	228
IPR001611	Leu-rich_rpt	Pfam	265	324
IPR001611	Leu-rich_rpt	Pfam	629	687
IPR001611	Leu-rich_rpt	Pfam	390	449
IPR001611	Leu-rich_rpt	Pfam	778	833
IPR001611	Leu-rich_rpt	Pfam	76	131
IPR001611	Leu-rich_rpt	Pfam	367	388
IPR001611	Leu-rich_rpt	Pfam	342	364
IPR001611	Leu-rich_rpt	Pfam	510	532
IPR001611	Leu-rich_rpt	Pfam	725	747
IPR001611	Leu-rich_rpt	Pfam	242	263
IPR001611	Leu-rich_rpt	Pfam	487	508
IPR001611	Leu-rich_rpt	Pfam	702	723
IPR001611	Leu-rich_rpt	Pfam	750	771
IPR032675	LRR_dom_sf	Gene3D	26	187
IPR032675	LRR_dom_sf	Gene3D	337	576
IPR032675	LRR_dom_sf	Gene3D	577	867
IPR017441	Protein_kinase_ATP_BS	ProSitePatterns	955	977
IPR011009	Kinase-like_dom_sf	SUPERFAMILY	932	1028
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	436	460
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	796	819
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	723	746
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	747	771
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	263	286
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	215	239
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	820	851
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	484	508
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	191	214
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	388	412
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	118	141
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	341	364
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	675	699
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	311	335
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	532	556
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	94	117
IPR013210	LRR_N_plant-typ	Pfam	27	67
IPR032675	LRR_dom_sf	Gene3D	191	260
IPR032675	LRR_dom_sf	Gene3D	26	187
IPR013210	LRR_N_plant-typ	Pfam	27	67
IPR017441	Protein_kinase_ATP_BS	ProSitePatterns	955	977
IPR011009	Kinase-like_dom_sf	SUPERFAMILY	932	1028
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	796	819
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	436	460
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	723	746
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	747	771
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	263	286
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	215	239
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	820	851
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	484	508
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	191	214
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	341	364
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	388	412
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	118	141
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	675	699
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	311	335
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	532	556
IPR003591	Leu-rich_rpt_typical-subtyp	SMART	94	117
IPR032675	LRR_dom_sf	Gene3D	261	336
IPR001611	Leu-rich_rpt	Pfam	629	687
IPR001611	Leu-rich_rpt	Pfam	778	833
IPR001611	Leu-rich_rpt	Pfam	97	153
IPR001611	Leu-rich_rpt	Pfam	510	569
IPR001611	Leu-rich_rpt	Pfam	390	448
IPR001611	Leu-rich_rpt	Pfam	169	228
IPR001611	Leu-rich_rpt	Pfam	241	300
IPR032675	LRR_dom_sf	Gene3D	191	260
IPR032675	LRR_dom_sf	Gene3D	337	576
IPR032675	LRR_dom_sf	Gene3D	577	867

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d006420_T002

Expression Profile

Co-expression Networks

Functional Annotation