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  5. Zm00001d006533_T007

Zm00001d006533_T007


Description : villin 4


Gene families : OG_01_0000277 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000277_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d006533_T007
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d006533_T007
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_296
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_235


Type GO Term Name Evidence Source
MF GO:0003779 actin binding ISM GOs from InterProScan
BP GO:0007010 cytoskeleton organization ISM GOs from InterProScan
MF GO:0051015 actin filament binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036886 Villin_headpiece_dom_sf Gene3D 900 962
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 521 615
IPR007122 Villin/Gelsolin PRINTS 472 492
IPR007122 Villin/Gelsolin PRINTS 595 614
IPR007122 Villin/Gelsolin PRINTS 647 669
IPR007122 Villin/Gelsolin PRINTS 325 346
IPR007122 Villin/Gelsolin PRINTS 535 555
IPR007122 Villin/Gelsolin PRINTS 439 457
IPR007122 Villin/Gelsolin PRINTS 414 430
IPR036180 Gelsolin-like_dom_sf SUPERFAMILY 249 430
IPR007122 Villin/Gelsolin PANTHER 5 956
IPR007122 Villin/Gelsolin SMART 520 609
IPR007122 Villin/Gelsolin SMART 19 117
IPR007122 Villin/Gelsolin SMART 626 722
IPR007122 Villin/Gelsolin SMART 254 346
IPR007122 Villin/Gelsolin SMART 139 236
IPR007122 Villin/Gelsolin SMART 395 492
IPR036886 Villin_headpiece_dom_sf SUPERFAMILY 888 962
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 133 251
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 616 740
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 252 357
IPR007123 Gelsolin-like_dom Pfam 641 715
IPR007123 Gelsolin-like_dom Pfam 268 339
IPR007123 Gelsolin-like_dom Pfam 30 111
IPR007123 Gelsolin-like_dom Pfam 152 219
IPR007123 Gelsolin-like_dom Pfam 407 483
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 384 520
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 7 132
IPR003128 Villin_headpiece Pfam 927 962
IPR003128 Villin_headpiece ProSiteProfiles 897 962
IPR003128 Villin_headpiece SMART 927 962
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 252 357
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 133 251
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 616 740
IPR036886 Villin_headpiece_dom_sf SUPERFAMILY 888 962
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 7 132
IPR003128 Villin_headpiece Pfam 927 962
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 521 615
IPR003128 Villin_headpiece ProSiteProfiles 897 962
IPR036886 Villin_headpiece_dom_sf Gene3D 900 962
IPR003128 Villin_headpiece SMART 927 962
IPR007123 Gelsolin-like_dom Pfam 32 111
IPR007123 Gelsolin-like_dom Pfam 269 339
IPR007123 Gelsolin-like_dom Pfam 641 715
IPR007123 Gelsolin-like_dom Pfam 407 485
IPR007123 Gelsolin-like_dom Pfam 152 218
IPR036180 Gelsolin-like_dom_sf SUPERFAMILY 249 430
IPR007122 Villin/Gelsolin PRINTS 472 492
IPR007122 Villin/Gelsolin PRINTS 595 614
IPR007122 Villin/Gelsolin PRINTS 647 669
IPR007122 Villin/Gelsolin PRINTS 325 346
IPR007122 Villin/Gelsolin PRINTS 535 555
IPR007122 Villin/Gelsolin PRINTS 439 457
IPR007122 Villin/Gelsolin PRINTS 414 430
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 384 520
IPR007122 Villin/Gelsolin PANTHER 1 962
IPR007122 Villin/Gelsolin SMART 520 609
IPR007122 Villin/Gelsolin SMART 19 117
IPR007122 Villin/Gelsolin SMART 254 346
IPR007122 Villin/Gelsolin SMART 626 722
IPR007122 Villin/Gelsolin SMART 139 236
IPR007122 Villin/Gelsolin SMART 395 492

No CAZYmes available for this sequence

No external refs found!