Zm00001d006580_T004

Description : Zinc finger, RING-type;Transcription factor jumonji/aspartyl beta-hydroxylase

Gene families : OG_01_0004021 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004021_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d006580_T004
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d006580_T004
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_157
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_244

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006482	protein demethylation	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008214	protein dealkylation	None	Extended
BP	GO:0016570	histone modification	None	Extended
BP	GO:0016577	histone demethylation	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0032451	demethylase activity	None	Extended
MF	GO:0032452	histone demethylase activity	None	Extended
MF	GO:0032454	histone H3K9 demethylase activity	ISM	GOs from InterProScan
BP	GO:0033169	histone H3-K9 demethylation	ISM	GOs from InterProScan
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070076	histone lysine demethylation	None	Extended
BP	GO:0070988	demethylation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140457	protein demethylase activity	None	Extended
MF	GO:0140993	histone modifying activity	None	Extended
MF	GO:0141052	histone H3 demethylase activity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR045109	JHDM2-like	PANTHER	42	596
IPR014977	WRC_dom	Pfam	229	264
IPR001841	Znf_RING	ProSiteProfiles	374	420
IPR018866	Znf-4CXXC_R1	Pfam	369	434
IPR014977	WRC_dom	ProSiteProfiles	228	272
IPR014977	WRC_dom	ProSiteProfiles	228	272
IPR014977	WRC_dom	Pfam	229	264
IPR001841	Znf_RING	ProSiteProfiles	374	420
IPR045109	JHDM2-like	PANTHER	105	587
IPR045109	JHDM2-like	PANTHER	43	114
IPR018866	Znf-4CXXC_R1	Pfam	369	434

No CAZYmes available for this sequence

External Links

No external refs found!