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  5. Zm00001d006667_T003

Zm00001d006667_T003


Description : Succinyl-CoA ligase, alpha subunit


Gene families : OG_01_0015162 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0015162_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d006667_T003
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d006667_T003
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_127
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_90


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR003781 CoA-bd Pfam 40 133
IPR016102 Succinyl-CoA_synth-like Gene3D 156 262
IPR036291 NAD(P)-bd_dom_sf SUPERFAMILY 35 157
IPR016102 Succinyl-CoA_synth-like SUPERFAMILY 158 270
IPR033847 Citrt_syn/SCS-alpha_CS ProSitePatterns 187 216
IPR005811 SUCC_ACL_C Pfam 186 242
IPR003781 CoA-bd SMART 38 134
IPR033847 Citrt_syn/SCS-alpha_CS ProSitePatterns 187 216
IPR003781 CoA-bd Pfam 40 133
IPR036291 NAD(P)-bd_dom_sf SUPERFAMILY 35 157
IPR016102 Succinyl-CoA_synth-like SUPERFAMILY 158 270
IPR003781 CoA-bd SMART 38 134
IPR016102 Succinyl-CoA_synth-like Gene3D 156 262
IPR005811 SUCC_ACL_C Pfam 186 242

No CAZYmes available for this sequence

No external refs found!