Zm00001d006768_T001

Description : C2H2-like zinc finger protein

Gene families : OG_01_0018338 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0018338_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d006768_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d006768_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_237
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_51

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of DNA-templated transcription	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR013087	Znf_C2H2_type	SMART	11	33
IPR013087	Znf_C2H2_type	SMART	246	268
IPR013087	Znf_C2H2_type	ProSiteProfiles	246	273
IPR013087	Znf_C2H2_type	ProSiteProfiles	11	38
IPR044303	ZAT1/4/9	PANTHER	10	381
IPR013087	Znf_C2H2_type	Pfam	10	33
IPR013087	Znf_C2H2_type	Pfam	245	270
IPR013087	Znf_C2H2_type	ProSitePatterns	13	33
IPR013087	Znf_C2H2_type	ProSitePatterns	248	268
IPR036236	Znf_C2H2_sf	SUPERFAMILY	11	268
IPR044303	ZAT1/4/9	PANTHER	214	382
IPR044303	ZAT1/4/9	PANTHER	1	212
IPR013087	Znf_C2H2_type	ProSiteProfiles	11	38
IPR013087	Znf_C2H2_type	ProSitePatterns	13	33
IPR013087	Znf_C2H2_type	ProSitePatterns	248	268
IPR013087	Znf_C2H2_type	ProSiteProfiles	246	273
IPR013087	Znf_C2H2_type	SMART	11	33
IPR013087	Znf_C2H2_type	SMART	246	268
IPR036236	Znf_C2H2_sf	SUPERFAMILY	11	268

No CAZYmes available for this sequence

External Links

No external refs found!