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  5. Zm00001d007065_T007

Zm00001d007065_T007


Description : Nucleoporin autopeptidase


Gene families : OG_01_0000821 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000821_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d007065_T007
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d007065_T007
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_250
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_122


Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore ISM GOs from InterProScan
BP GO:0006913 nucleocytoplasmic transport ISM GOs from InterProScan
MF GO:0017056 structural constituent of nuclear pore ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR037665 Nucleoporin_S59-like PANTHER 241 964
IPR007230 Nup98_auto-Pept-S59_dom Pfam 819 964
IPR036903 Nup98_auto-Pept-S59_dom_sf Gene3D 815 965
IPR036903 Nup98_auto-Pept-S59_dom_sf SUPERFAMILY 812 964
IPR007230 Nup98_auto-Pept-S59_dom ProSiteProfiles 818 959
IPR007230 Nup98_auto-Pept-S59_dom Pfam 819 964
IPR007230 Nup98_auto-Pept-S59_dom ProSiteProfiles 818 959
IPR037665 Nucleoporin_S59-like PANTHER 47 270
IPR036903 Nup98_auto-Pept-S59_dom_sf Gene3D 815 965
IPR036903 Nup98_auto-Pept-S59_dom_sf SUPERFAMILY 812 964
IPR037665 Nucleoporin_S59-like PANTHER 262 963

No CAZYmes available for this sequence

No external refs found!