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  5. Zm00001d007113_T001

Zm00001d007113_T001


Description : xylose isomerase family protein


Gene families : OG_01_0003550 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003550_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d007113_T001 No neighbors in network
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d007113_T001
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_138


Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
MF GO:0009045 xylose isomerase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001998 Xylose_isomerase ProSiteProfiles 92 493
IPR013452 Xylose_isom_bac NCBIfam 50 491
IPR036237 Xyl_isomerase-like_sf SUPERFAMILY 49 489
IPR001998 Xylose_isomerase Hamap 57 493
IPR001998 Xylose_isomerase PRINTS 390 401
IPR001998 Xylose_isomerase PRINTS 190 210
IPR001998 Xylose_isomerase PRINTS 264 283
IPR001998 Xylose_isomerase PRINTS 328 355
IPR001998 Xylose_isomerase PRINTS 286 310
IPR001998 Xylose_isomerase PRINTS 357 368
IPR001998 Xylose_isomerase PRINTS 237 258
IPR001998 Xylose_isomerase PRINTS 149 171
IPR001998 Xylose_isomerase PRINTS 213 232
IPR001998 Xylose_isomerase PRINTS 390 401
IPR001998 Xylose_isomerase PRINTS 190 210
IPR001998 Xylose_isomerase PRINTS 264 283
IPR001998 Xylose_isomerase PRINTS 328 355
IPR001998 Xylose_isomerase PRINTS 286 310
IPR001998 Xylose_isomerase PRINTS 357 368
IPR001998 Xylose_isomerase PRINTS 237 258
IPR001998 Xylose_isomerase PRINTS 149 171
IPR001998 Xylose_isomerase PRINTS 213 232
IPR013022 Xyl_isomerase-like_TIM-brl Pfam 181 339
IPR013452 Xylose_isom_bac TIGRFAM 50 491
IPR036237 Xyl_isomerase-like_sf SUPERFAMILY 49 489
IPR001998 Xylose_isomerase ProSiteProfiles 92 493
IPR001998 Xylose_isomerase Hamap 57 493

No CAZYmes available for this sequence

No external refs found!