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  5. Zm00001d007173_T003

Zm00001d007173_T003


Description : HSI2-like 1


Gene families : OG_01_0002868 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002868_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d007173_T003
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d007173_T003
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_104
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_263


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISM GOs from InterProScan
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR003340 B3_DNA-bd CDD 425 514
IPR011124 Znf_CW Pfam 681 723
IPR015300 DNA-bd_pseudobarrel_sf Gene3D 421 519
IPR015300 DNA-bd_pseudobarrel_sf SUPERFAMILY 438 515
IPR011124 Znf_CW ProSiteProfiles 676 726
IPR003340 B3_DNA-bd SMART 423 515
IPR003340 B3_DNA-bd ProSiteProfiles 452 516
IPR003340 B3_DNA-bd Pfam 446 514
IPR015300 DNA-bd_pseudobarrel_sf Gene3D 421 519
IPR003340 B3_DNA-bd SMART 423 515
IPR003340 B3_DNA-bd ProSiteProfiles 452 516
IPR011124 Znf_CW Pfam 681 723
IPR015300 DNA-bd_pseudobarrel_sf SUPERFAMILY 438 515
IPR003340 B3_DNA-bd CDD 425 514
IPR003340 B3_DNA-bd Pfam 446 514
IPR011124 Znf_CW ProSiteProfiles 676 726

No CAZYmes available for this sequence

No external refs found!