Zm00001d007232_T001

Description : Tudor/PWWP/MBT superfamily protein

Gene families : OG_01_0013020 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013020_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d007232_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d007232_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_17
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_268

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000313	PWWP_dom	SMART	47	103
IPR017956	AT_hook_DNA-bd_motif	PRINTS	281	291
IPR017956	AT_hook_DNA-bd_motif	PRINTS	18	28
IPR000313	PWWP_dom	ProSiteProfiles	49	105
IPR000313	PWWP_dom	Pfam	50	104
IPR000637	HMGI/Y_DNA-bd_CS	ProSitePatterns	15	26
IPR017956	AT_hook_DNA-bd_motif	SMART	283	295
IPR017956	AT_hook_DNA-bd_motif	SMART	18	30
IPR017956	AT_hook_DNA-bd_motif	PRINTS	281	291
IPR017956	AT_hook_DNA-bd_motif	PRINTS	18	28
IPR000313	PWWP_dom	ProSiteProfiles	49	105
IPR017956	AT_hook_DNA-bd_motif	SMART	283	295
IPR017956	AT_hook_DNA-bd_motif	SMART	18	30
IPR000313	PWWP_dom	SMART	47	103
IPR000313	PWWP_dom	Pfam	50	104
IPR000637	HMGI/Y_DNA-bd_CS	ProSitePatterns	15	26

No CAZYmes available for this sequence

External Links

No external refs found!