Zm00001d007236_T001

Description : CCAAT-binding factor

Gene families : OG_01_0152831 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0152831_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d007236_T001	No neighbors in network
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d007236_T001
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_163

Type	GO Term	Name	Evidence	Source
BP	GO:0000469	obsolete cleavage involved in rRNA processing	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0022613	ribonucleoprotein complex biogenesis	None	Extended
BP	GO:0042254	ribosome biogenesis	ISM	GOs from InterProScan
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR005612	CCAAT-binding_factor	Pfam	90	134
IPR009292	RRP36	Pfam	135	196
IPR012340	NA-bd_OB-fold	SUPERFAMILY	189	211
IPR027193	Noc4	PANTHER	32	140
IPR012340	NA-bd_OB-fold	SUPERFAMILY	189	211
IPR009292	RRP36	Pfam	135	196
IPR027193	Noc4	PANTHER	3	140
IPR005612	CCAAT-binding_factor	Pfam	90	137

No CAZYmes available for this sequence

External Links

No external refs found!