1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001d007383_T002

Zm00001d007383_T002


Description : Glycosyl hydrolase family 38 protein


Gene families : OG_01_0000133 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000133_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d007383_T002
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d007383_T002
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_96
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_143


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
MF GO:0004559 alpha-mannosidase activity ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
BP GO:0006013 mannose metabolic process ISM GOs from InterProScan
MF GO:0030246 carbohydrate binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR037094 Glyco_hydro_38_cen_sf Gene3D 397 453
IPR028995 Glyco_hydro_57/38_cen_sf SUPERFAMILY 354 448
IPR000602 Glyco_hydro_38_N Pfam 38 350
IPR037094 Glyco_hydro_38_cen_sf Gene3D 319 396
IPR013780 Glyco_hydro_b Gene3D 720 842
IPR011013 Gal_mutarotase_sf_dom SUPERFAMILY 709 1266
IPR027291 Glyco_hydro_38_N_sf Gene3D 37 318
IPR015341 Glyco_hydro_38_cen SMART 355 429
IPR011330 Glyco_hydro/deAcase_b/a-brl SUPERFAMILY 26 353
IPR011682 Glyco_hydro_38_C Pfam 847 1074
IPR015341 Glyco_hydro_38_cen Pfam 355 447
IPR048534 Man2a1-like_dom Pfam 767 818
IPR028995 Glyco_hydro_57/38_cen_sf SUPERFAMILY 354 448
IPR011682 Glyco_hydro_38_C Pfam 848 1074
IPR000602 Glyco_hydro_38_N Pfam 38 350
IPR011330 Glyco_hydro/deAcase_b/a-brl SUPERFAMILY 26 353
IPR015341 Glyco_hydro_38_cen SMART 355 429
IPR015341 Glyco_hydro_38_cen Pfam 355 447
IPR011013 Gal_mutarotase_sf_dom SUPERFAMILY 709 1266
IPR037094 Glyco_hydro_38_cen_sf Gene3D 319 396
IPR027291 Glyco_hydro_38_N_sf Gene3D 37 318
IPR013780 Glyco_hydro_b Gene3D 720 842
IPR037094 Glyco_hydro_38_cen_sf Gene3D 397 453
IPR041147 GH38_C Pfam 1157 1263
HMM Family HMM Length Query Length e-Value Query Start Query End
GH38 269 1276 1.1e-75 38 350
No external refs found!