- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : disease resistance family protein / LRR family protein
Gene families : OG_01_0002654 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002654_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d007485_T001 | |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d007485_T001 | No neighbors in network |
| Cluster | Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_158 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR032675 | LRR_dom_sf | Gene3D | 39 | 247 |
| IPR001611 | Leu-rich_rpt | Pfam | 357 | 416 |
| IPR001611 | Leu-rich_rpt | Pfam | 229 | 291 |
| IPR001611 | Leu-rich_rpt | Pfam | 642 | 699 |
| IPR001611 | Leu-rich_rpt | Pfam | 427 | 465 |
| IPR001611 | Leu-rich_rpt | Pfam | 829 | 867 |
| IPR032675 | LRR_dom_sf | Gene3D | 448 | 912 |
| IPR032675 | LRR_dom_sf | Gene3D | 248 | 355 |
| IPR032675 | LRR_dom_sf | Gene3D | 356 | 447 |
| IPR001611 | Leu-rich_rpt | Pfam | 713 | 735 |
| IPR001611 | Leu-rich_rpt | Pfam | 787 | 806 |
| IPR001611 | Leu-rich_rpt | Pfam | 809 | 828 |
| IPR001611 | Leu-rich_rpt | Pfam | 550 | 569 |
| IPR001611 | Leu-rich_rpt | Pfam | 595 | 614 |
| IPR001611 | Leu-rich_rpt | Pfam | 152 | 174 |
| IPR013210 | LRR_N_plant-typ | Pfam | 41 | 82 |
| IPR003591 | Leu-rich_rpt_typical-subtyp | SMART | 379 | 402 |
| IPR003591 | Leu-rich_rpt_typical-subtyp | SMART | 452 | 475 |
| IPR003591 | Leu-rich_rpt_typical-subtyp | SMART | 806 | 830 |
| IPR003591 | Leu-rich_rpt_typical-subtyp | SMART | 278 | 302 |
| IPR003591 | Leu-rich_rpt_typical-subtyp | SMART | 403 | 426 |
| IPR003591 | Leu-rich_rpt_typical-subtyp | SMART | 427 | 451 |
| IPR003591 | Leu-rich_rpt_typical-subtyp | SMART | 711 | 735 |
| IPR003591 | Leu-rich_rpt_typical-subtyp | SMART | 123 | 146 |
| IPR003591 | Leu-rich_rpt_typical-subtyp | SMART | 854 | 876 |
| IPR032675 | LRR_dom_sf | Gene3D | 39 | 247 |
| IPR032675 | LRR_dom_sf | Gene3D | 248 | 355 |
| IPR032675 | LRR_dom_sf | Gene3D | 356 | 447 |
| IPR032675 | LRR_dom_sf | Gene3D | 448 | 912 |
| IPR001611 | Leu-rich_rpt | Pfam | 357 | 416 |
| IPR001611 | Leu-rich_rpt | Pfam | 427 | 465 |
| IPR001611 | Leu-rich_rpt | Pfam | 642 | 699 |
| IPR001611 | Leu-rich_rpt | Pfam | 229 | 291 |
| IPR001611 | Leu-rich_rpt | Pfam | 713 | 735 |
| IPR013210 | LRR_N_plant-typ | Pfam | 42 | 82 |
| IPR003591 | Leu-rich_rpt_typical-subtyp | SMART | 379 | 402 |
| IPR003591 | Leu-rich_rpt_typical-subtyp | SMART | 452 | 475 |
| IPR003591 | Leu-rich_rpt_typical-subtyp | SMART | 806 | 830 |
| IPR003591 | Leu-rich_rpt_typical-subtyp | SMART | 278 | 302 |
| IPR003591 | Leu-rich_rpt_typical-subtyp | SMART | 403 | 426 |
| IPR003591 | Leu-rich_rpt_typical-subtyp | SMART | 427 | 451 |
| IPR003591 | Leu-rich_rpt_typical-subtyp | SMART | 711 | 735 |
| IPR003591 | Leu-rich_rpt_typical-subtyp | SMART | 123 | 146 |
| IPR003591 | Leu-rich_rpt_typical-subtyp | SMART | 854 | 876 |
No CAZYmes available for this sequence
| No external refs found! |