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Description : zinc knuckle (CCHC-type) family protein
Gene families : OG_01_0003163 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003163_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d007507_T001 | |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d007507_T001 | No neighbors in network |
| Cluster | Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_317 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | ISM | GOs from InterProScan |
| MF | GO:0008270 | zinc ion binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR036875 | Znf_CCHC_sf | SUPERFAMILY | 215 | 261 |
| IPR001878 | Znf_CCHC | Pfam | 325 | 340 |
| IPR001878 | Znf_CCHC | Pfam | 176 | 191 |
| IPR001878 | Znf_CCHC | Pfam | 218 | 232 |
| IPR001878 | Znf_CCHC | SMART | 271 | 284 |
| IPR001878 | Znf_CCHC | SMART | 198 | 214 |
| IPR001878 | Znf_CCHC | SMART | 295 | 311 |
| IPR001878 | Znf_CCHC | SMART | 324 | 340 |
| IPR001878 | Znf_CCHC | SMART | 244 | 260 |
| IPR001878 | Znf_CCHC | SMART | 176 | 192 |
| IPR001878 | Znf_CCHC | SMART | 217 | 233 |
| IPR001878 | Znf_CCHC | ProSiteProfiles | 177 | 191 |
| IPR001878 | Znf_CCHC | ProSiteProfiles | 325 | 340 |
| IPR036875 | Znf_CCHC_sf | SUPERFAMILY | 175 | 215 |
| IPR001878 | Znf_CCHC | ProSiteProfiles | 199 | 214 |
| IPR001878 | Znf_CCHC | ProSiteProfiles | 218 | 233 |
| IPR036875 | Znf_CCHC_sf | SUPERFAMILY | 287 | 342 |
| IPR001878 | Znf_CCHC | SMART | 271 | 284 |
| IPR001878 | Znf_CCHC | SMART | 198 | 214 |
| IPR001878 | Znf_CCHC | SMART | 295 | 311 |
| IPR001878 | Znf_CCHC | SMART | 324 | 340 |
| IPR001878 | Znf_CCHC | SMART | 244 | 260 |
| IPR001878 | Znf_CCHC | SMART | 176 | 192 |
| IPR001878 | Znf_CCHC | SMART | 217 | 233 |
| IPR001878 | Znf_CCHC | ProSiteProfiles | 177 | 191 |
| IPR001878 | Znf_CCHC | ProSiteProfiles | 325 | 340 |
| IPR001878 | Znf_CCHC | ProSiteProfiles | 218 | 233 |
| IPR001878 | Znf_CCHC | Pfam | 176 | 191 |
| IPR001878 | Znf_CCHC | Pfam | 218 | 232 |
| IPR001878 | Znf_CCHC | Pfam | 325 | 340 |
| IPR001878 | Znf_CCHC | ProSiteProfiles | 199 | 214 |
| IPR036875 | Znf_CCHC_sf | SUPERFAMILY | 215 | 261 |
| IPR036875 | Znf_CCHC_sf | SUPERFAMILY | 175 | 215 |
| IPR036875 | Znf_CCHC_sf | SUPERFAMILY | 287 | 342 |
No CAZYmes available for this sequence
| No external refs found! |