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  5. Zm00001d007577_T001

Zm00001d007577_T001


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0004053 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004053_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d007577_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d007577_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_171
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_219


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0031929 TOR signaling ISM GOs from InterProScan
CC GO:0031931 TORC1 complex ISM GOs from InterProScan
CC GO:0031932 TORC2 complex ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR019775 WD40_repeat_CS ProSitePatterns 230 244
IPR037588 MLST8 PANTHER 5 312
IPR011047 Quinoprotein_ADH-like_supfam SUPERFAMILY 7 304
IPR001680 WD40_rpt ProSiteProfiles 207 252
IPR001680 WD40_rpt SMART 246 285
IPR001680 WD40_rpt SMART 150 190
IPR001680 WD40_rpt SMART 109 147
IPR001680 WD40_rpt SMART 200 243
IPR001680 WD40_rpt SMART 24 62
IPR001680 WD40_rpt SMART 67 106
IPR001680 WD40_rpt Pfam 248 284
IPR001680 WD40_rpt Pfam 202 243
IPR001680 WD40_rpt Pfam 110 147
IPR001680 WD40_rpt Pfam 69 106
IPR001680 WD40_rpt Pfam 25 62
IPR001680 WD40_rpt ProSiteProfiles 1 30
IPR001680 WD40_rpt ProSiteProfiles 115 148
IPR001680 WD40_rpt ProSiteProfiles 74 115
IPR019775 WD40_repeat_CS ProSitePatterns 8 22
IPR020472 G-protein_beta_WD-40_rep PRINTS 272 286
IPR020472 G-protein_beta_WD-40_rep PRINTS 93 107
IPR020472 G-protein_beta_WD-40_rep PRINTS 230 244
IPR019775 WD40_repeat_CS ProSitePatterns 134 148
IPR001680 WD40_rpt ProSiteProfiles 253 294
IPR019775 WD40_repeat_CS ProSitePatterns 93 107
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 5 310
IPR020472 G-protein_beta_WD-40_rep PRINTS 272 286
IPR020472 G-protein_beta_WD-40_rep PRINTS 93 107
IPR020472 G-protein_beta_WD-40_rep PRINTS 230 244
IPR001680 WD40_rpt ProSiteProfiles 253 294
IPR001680 WD40_rpt Pfam 36 62
IPR001680 WD40_rpt Pfam 248 284
IPR001680 WD40_rpt Pfam 110 147
IPR001680 WD40_rpt Pfam 69 106
IPR001680 WD40_rpt Pfam 202 243
IPR001680 WD40_rpt ProSiteProfiles 74 115
IPR001680 WD40_rpt SMART 246 285
IPR001680 WD40_rpt SMART 150 190
IPR001680 WD40_rpt SMART 109 147
IPR001680 WD40_rpt SMART 200 243
IPR001680 WD40_rpt SMART 67 106
IPR001680 WD40_rpt SMART 24 62
IPR019775 WD40_repeat_CS ProSitePatterns 230 244
IPR037588 MLST8 PANTHER 3 310
IPR019775 WD40_repeat_CS ProSitePatterns 93 107
IPR001680 WD40_rpt ProSiteProfiles 1 30
IPR019775 WD40_repeat_CS ProSitePatterns 134 148
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 5 310
IPR001680 WD40_rpt ProSiteProfiles 207 252
IPR001680 WD40_rpt ProSiteProfiles 115 148
IPR011047 Quinoprotein_ADH-like_supfam SUPERFAMILY 7 304
IPR019775 WD40_repeat_CS ProSitePatterns 8 22

No CAZYmes available for this sequence

No external refs found!