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  5. Zm00001d007653_T003

Zm00001d007653_T003


Description : laccase 7


Gene families : OG_01_0007444 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007444_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d007653_T003
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d007653_T003
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_209
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_39


Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding ISM GOs from InterProScan
MF GO:0016491 oxidoreductase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR008972 Cupredoxin Gene3D 12 144
IPR001117 Cu-oxidase_2nd Pfam 162 314
IPR011706 Cu-oxidase_C Pfam 454 592
IPR008972 Cupredoxin SUPERFAMILY 402 605
IPR045087 Cu-oxidase_fam PANTHER 38 602
IPR008972 Cupredoxin Gene3D 394 615
IPR002355 Cu_oxidase_Cu_BS ProSitePatterns 573 584
IPR008972 Cupredoxin SUPERFAMILY 156 364
IPR034289 CuRO_3_LCC CDD 453 593
IPR011707 Cu-oxidase-like_N Pfam 33 146
IPR008972 Cupredoxin SUPERFAMILY 26 173
IPR034288 CuRO_1_LCC CDD 28 144
IPR008972 Cupredoxin Gene3D 160 343
IPR034285 CuRO_2_LCC CDD 163 315
IPR033138 Cu_oxidase_CS ProSitePatterns 568 588
IPR011706 Cu-oxidase_C Pfam 457 592
IPR001117 Cu-oxidase_2nd Pfam 162 297
IPR002355 Cu_oxidase_Cu_BS ProSitePatterns 573 584
IPR008972 Cupredoxin Gene3D 12 144
IPR008972 Cupredoxin SUPERFAMILY 402 605
IPR011707 Cu-oxidase-like_N Pfam 33 146
IPR033138 Cu_oxidase_CS ProSitePatterns 568 588
IPR008972 Cupredoxin Gene3D 394 615
IPR045087 Cu-oxidase_fam PANTHER 8 614
IPR008972 Cupredoxin SUPERFAMILY 156 364
IPR034288 CuRO_1_LCC CDD 28 144
IPR008972 Cupredoxin Gene3D 160 343
IPR034285 CuRO_2_LCC CDD 163 315
IPR034289 CuRO_3_LCC CDD 453 593
IPR008972 Cupredoxin SUPERFAMILY 26 173
HMM Family HMM Length Query Length e-Value Query Start Query End
AA1 358 626 3.4e-113 43 585
No external refs found!