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  5. Zm00001d008210_T002

Zm00001d008210_T002


Description : germin-like protein 5


Gene families : OG_01_0000853 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000853_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d008210_T002
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d008210_T002
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_169
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_17


Type GO Term Name Evidence Source
MF GO:0030145 manganese ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR006045 Cupin_1 Pfam 58 204
IPR019780 Germin_Mn-BS ProSitePatterns 100 113
IPR014710 RmlC-like_jellyroll Gene3D 21 213
IPR001929 Germin PRINTS 135 155
IPR001929 Germin PRINTS 105 125
IPR001929 Germin PRINTS 168 183
IPR001929 Germin CDD 22 211
IPR011051 RmlC_Cupin_sf SUPERFAMILY 22 212
IPR006045 Cupin_1 SMART 57 205
IPR014710 RmlC-like_jellyroll Gene3D 21 213
IPR006045 Cupin_1 SMART 57 205
IPR006045 Cupin_1 Pfam 58 203
IPR001929 Germin PRINTS 135 155
IPR001929 Germin PRINTS 105 125
IPR001929 Germin PRINTS 168 183
IPR011051 RmlC_Cupin_sf SUPERFAMILY 22 212
IPR019780 Germin_Mn-BS ProSitePatterns 100 113

No CAZYmes available for this sequence

No external refs found!