Zm00001d008229_T001

Description : Duplicated homeodomain-like superfamily protein

Gene families : OG_01_0015434 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0015434_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d008229_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d008229_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_126
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_733

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR017930	Myb_dom	ProSiteProfiles	133	189
IPR001005	SANT/Myb	SMART	7	65
IPR001005	SANT/Myb	SMART	137	187
IPR001005	SANT/Myb	CDD	140	185
IPR006447	Myb_dom_plants	NCBIfam	137	187
IPR001005	SANT/Myb	Pfam	140	185
IPR009057	Homeobox-like_sf	SUPERFAMILY	135	190
IPR017884	SANT_dom	ProSiteProfiles	141	189
IPR001005	SANT/Myb	ProSiteProfiles	133	185
IPR001005	SANT/Myb	ProSiteProfiles	133	185
IPR006447	Myb_dom_plants	TIGRFAM	137	187
IPR017884	SANT_dom	ProSiteProfiles	141	189
IPR001005	SANT/Myb	SMART	7	65
IPR001005	SANT/Myb	SMART	137	187
IPR001005	SANT/Myb	CDD	140	185
IPR017930	Myb_dom	ProSiteProfiles	133	189
IPR017930	Myb_dom	Pfam	140	184
IPR009057	Homeobox-like_sf	SUPERFAMILY	135	190

No CAZYmes available for this sequence

External Links

No external refs found!