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  5. Zm00001d008249_T012

Zm00001d008249_T012


Description : Argonaute family protein


Gene families : OG_01_0000282 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000282_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d008249_T012
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d008249_T012
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_167
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_241


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR003100 PAZ_dom ProSiteProfiles 314 383
IPR003165 Piwi SMART 552 861
IPR012337 RNaseH-like_sf SUPERFAMILY 536 859
IPR045246 Piwi_ago-like CDD 427 855
IPR003165 Piwi ProSiteProfiles 552 861
IPR032474 Argonaute_N Pfam 49 209
IPR032472 ArgoL2 Pfam 409 454
IPR014811 ArgoL1 SMART 219 271
IPR036397 RNaseH_sf Gene3D 619 900
IPR014811 ArgoL1 Pfam 221 270
IPR003165 Piwi Pfam 553 861
IPR003100 PAZ_dom Pfam 275 399
IPR036085 PAZ_dom_sf SUPERFAMILY 266 423
IPR003165 Piwi Pfam 553 861
IPR003165 Piwi SMART 552 861
IPR036085 PAZ_dom_sf SUPERFAMILY 266 423
IPR003100 PAZ_dom Pfam 275 399
IPR045246 Piwi_ago-like CDD 427 855
IPR012337 RNaseH-like_sf SUPERFAMILY 536 859
IPR032474 Argonaute_N Pfam 49 209
IPR003100 PAZ_dom ProSiteProfiles 314 383
IPR032472 ArgoL2 Pfam 409 454
IPR014811 ArgoL1 Pfam 221 269
IPR014811 ArgoL1 SMART 219 271
IPR003165 Piwi ProSiteProfiles 552 861
IPR036397 RNaseH_sf Gene3D 619 900

No CAZYmes available for this sequence

No external refs found!