Zm00001d008369_T001

Description : TCP-1/cpn60 chaperonin family protein

Gene families : OG_01_0009399 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009399_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d008369_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d008369_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_215
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_191

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005829	cytosol	ISM	GOs from InterProScan
CC	GO:0005832	chaperonin-containing T-complex	ISM	GOs from InterProScan
BP	GO:0006457	protein folding	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0051082	unfolded protein binding	ISM	GOs from InterProScan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0101031	protein folding chaperone complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR017998	Chaperone_TCP-1	PRINTS	30	46
IPR017998	Chaperone_TCP-1	PRINTS	365	387
IPR017998	Chaperone_TCP-1	PRINTS	54	72
IPR017998	Chaperone_TCP-1	PRINTS	84	103
IPR017998	Chaperone_TCP-1	PRINTS	399	411
IPR012716	Chap_CCT_beta	CDD	4	520
IPR002194	Chaperonin_TCP-1_CS	ProSitePatterns	56	72
IPR027409	GroEL-like_apical_dom_sf	Gene3D	209	361
IPR002194	Chaperonin_TCP-1_CS	ProSitePatterns	33	45
IPR027413	GROEL-like_equatorial_sf	SUPERFAMILY	12	517
IPR002423	Cpn60/GroEL/TCP-1	Pfam	28	516
IPR002194	Chaperonin_TCP-1_CS	ProSitePatterns	84	92
IPR027413	GROEL-like_equatorial_sf	Gene3D	25	514
IPR017998	Chaperone_TCP-1	PANTHER	8	517
IPR012716	Chap_CCT_beta	NCBIfam	4	521
IPR027410	TCP-1-like_intermed_sf	SUPERFAMILY	150	397
IPR027410	TCP-1-like_intermed_sf	Gene3D	140	397
IPR027409	GroEL-like_apical_dom_sf	SUPERFAMILY	204	370
IPR002423	Cpn60/GroEL/TCP-1	Pfam	28	515
IPR017998	Chaperone_TCP-1	PANTHER	4	523
IPR027409	GroEL-like_apical_dom_sf	Gene3D	209	361
IPR012716	Chap_CCT_beta	CDD	4	520
IPR002194	Chaperonin_TCP-1_CS	ProSitePatterns	33	45
IPR017998	Chaperone_TCP-1	PRINTS	30	46
IPR017998	Chaperone_TCP-1	PRINTS	365	387
IPR017998	Chaperone_TCP-1	PRINTS	54	72
IPR017998	Chaperone_TCP-1	PRINTS	84	103
IPR017998	Chaperone_TCP-1	PRINTS	399	411
IPR027413	GROEL-like_equatorial_sf	SUPERFAMILY	12	517
IPR027410	TCP-1-like_intermed_sf	Gene3D	140	397
IPR002194	Chaperonin_TCP-1_CS	ProSitePatterns	84	92
IPR027410	TCP-1-like_intermed_sf	SUPERFAMILY	150	397
IPR027413	GROEL-like_equatorial_sf	Gene3D	25	514
IPR027409	GroEL-like_apical_dom_sf	SUPERFAMILY	204	370
IPR012716	Chap_CCT_beta	TIGRFAM	4	521
IPR002194	Chaperonin_TCP-1_CS	ProSitePatterns	56	72
IPR012716	Chap_CCT_beta	PANTHER	4	523

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d008369_T001

Expression Profile

Co-expression Networks

Functional Annotation