1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001d008514_T001

Zm00001d008514_T001


Description : Protein with RING/U-box and TRAF-like domains


Gene families : OG_01_0010405 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010405_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d008514_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d008514_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_161
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_12


Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM GOs from InterProScan
BP GO:0006511 ubiquitin-dependent protein catabolic process ISM GOs from InterProScan
BP GO:0007275 multicellular organism development ISM GOs from InterProScan
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR013083 Znf_RING/FYVE/PHD Gene3D 128 184
IPR044286 SINL_plant PANTHER 38 323
IPR013010 Znf_SIAH ProSiteProfiles 131 189
IPR018121 7-in-absentia-prot_TRAF-dom Pfam 125 188
IPR013083 Znf_RING/FYVE/PHD Gene3D 128 184
IPR013010 Znf_SIAH ProSiteProfiles 131 189

No CAZYmes available for this sequence

No external refs found!