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  5. Zm00001d008595_T001

Zm00001d008595_T001


Description : RmlC-like cupins superfamily protein


Gene families : OG_01_0000420 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000420_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d008595_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d008595_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_267
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_115


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR012093 Pirin PIRSF 50 328
IPR008778 Pirin_C_dom Pfam 218 320
IPR003829 Pirin_N_dom Pfam 70 164
IPR012093 Pirin PANTHER 43 329
IPR014710 RmlC-like_jellyroll Gene3D 186 289
IPR011051 RmlC_Cupin_sf SUPERFAMILY 52 328
IPR014710 RmlC-like_jellyroll Gene3D 65 315
IPR008778 Pirin_C_dom Pfam 218 320
IPR012093 Pirin PANTHER 36 329
IPR012093 Pirin PIRSF 50 328
IPR003829 Pirin_N_dom Pfam 70 164
IPR014710 RmlC-like_jellyroll Gene3D 186 289
IPR011051 RmlC_Cupin_sf SUPERFAMILY 52 328
IPR014710 RmlC-like_jellyroll Gene3D 65 315

No CAZYmes available for this sequence

No external refs found!