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  5. Zm00001d008631_T003

Zm00001d008631_T003


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0002475 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002475_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d008631_T003
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d008631_T003 No neighbors in network
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_317


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011990 TPR-like_helical_dom_sf Gene3D 401 532
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 284 318
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 319 353
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 354 388
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 421 455
IPR011990 TPR-like_helical_dom_sf Gene3D 77 244
IPR011990 TPR-like_helical_dom_sf Gene3D 245 400
IPR002885 Pentatricopeptide_rpt Pfam 459 487
IPR002885 Pentatricopeptide_rpt Pfam 252 278
IPR002885 Pentatricopeptide_rpt Pfam 323 347
IPR002885 Pentatricopeptide_rpt Pfam 221 242
IPR002885 Pentatricopeptide_rpt Pfam 424 452
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 456 490
IPR002885 Pentatricopeptide_rpt NCBIfam 286 320
IPR002885 Pentatricopeptide_rpt NCBIfam 357 389
IPR002885 Pentatricopeptide_rpt NCBIfam 459 490
IPR002885 Pentatricopeptide_rpt Pfam 284 320
IPR002885 Pentatricopeptide_rpt Pfam 354 398
IPR002885 Pentatricopeptide_rpt Pfam 284 320
IPR002885 Pentatricopeptide_rpt Pfam 354 398
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 319 353
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 456 490
IPR002885 Pentatricopeptide_rpt Pfam 221 242
IPR002885 Pentatricopeptide_rpt Pfam 252 278
IPR002885 Pentatricopeptide_rpt Pfam 424 452
IPR002885 Pentatricopeptide_rpt Pfam 323 347
IPR002885 Pentatricopeptide_rpt Pfam 459 487
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 354 388
IPR011990 TPR-like_helical_dom_sf Gene3D 245 400
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 421 455
IPR002885 Pentatricopeptide_rpt TIGRFAM 459 490
IPR002885 Pentatricopeptide_rpt TIGRFAM 357 389
IPR002885 Pentatricopeptide_rpt TIGRFAM 286 320
IPR011990 TPR-like_helical_dom_sf Gene3D 401 532
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 284 318
IPR011990 TPR-like_helical_dom_sf Gene3D 77 244

No CAZYmes available for this sequence

No external refs found!