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  5. Zm00001d008651_T001

Zm00001d008651_T001


Description : pyruvate decarboxylase-2


Gene families : OG_01_0000639 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000639_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d008651_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d008651_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_41
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_155


Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding ISM GOs from InterProScan
MF GO:0003824 catalytic activity ISM GOs from InterProScan
MF GO:0016831 carboxy-lyase activity ISM GOs from InterProScan
MF GO:0030976 thiamine pyrophosphate binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR012110 PDC/IPDC-like PIRSF 23 588
IPR047214 TPP_PDC_IPDC CDD 394 576
IPR012110 PDC/IPDC-like PANTHER 20 593
IPR012000 Thiamin_PyroP_enz_cen_dom Pfam 229 345
IPR029035 DHS-like_NAD/FAD-binding_dom SUPERFAMILY 224 371
IPR011766 TPP_enzyme_TPP-bd Pfam 439 564
IPR047213 TPP_PYR_PDC_IPDC-like CDD 32 196
IPR029061 THDP-binding SUPERFAMILY 29 211
IPR012001 Thiamin_PyroP_enz_TPP-bd_dom Pfam 29 138
IPR029061 THDP-binding SUPERFAMILY 394 588
IPR012110 PDC/IPDC-like PANTHER 4 593
IPR012001 Thiamin_PyroP_enz_TPP-bd_dom Pfam 29 200
IPR012110 PDC/IPDC-like PIRSF 23 588
IPR029061 THDP-binding SUPERFAMILY 29 211
IPR011766 TPP_enzyme_TPP-bd Pfam 439 564
IPR029035 DHS-like_NAD/FAD-binding_dom SUPERFAMILY 224 371
IPR029061 THDP-binding SUPERFAMILY 394 588
IPR012000 Thiamin_PyroP_enz_cen_dom Pfam 229 341

No CAZYmes available for this sequence

No external refs found!