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  5. Zm00001d008922_T001

Zm00001d008922_T001


Description : global transcription factor group E4


Gene families : OG_01_0012249 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012249_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d008922_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d008922_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_116
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_202


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001487 Bromodomain PRINTS 176 194
IPR001487 Bromodomain PRINTS 144 157
IPR001487 Bromodomain PRINTS 194 213
IPR001487 Bromodomain PRINTS 160 176
IPR037377 GTE_bromo CDD 129 227
IPR001487 Bromodomain ProSiteProfiles 141 213
IPR001487 Bromodomain SMART 122 232
IPR027353 NET_dom Pfam 300 361
IPR001487 Bromodomain Pfam 133 217
IPR036427 Bromodomain-like_sf Gene3D 99 241
IPR038336 NET_sf Gene3D 293 373
IPR027353 NET_dom ProSiteProfiles 290 371
IPR036427 Bromodomain-like_sf SUPERFAMILY 112 234
IPR001487 Bromodomain SMART 122 232
IPR036427 Bromodomain-like_sf Gene3D 99 241
IPR027353 NET_dom ProSiteProfiles 290 371
IPR001487 Bromodomain ProSiteProfiles 141 213
IPR001487 Bromodomain Pfam 133 217
IPR027353 NET_dom Pfam 300 361
IPR001487 Bromodomain PRINTS 176 194
IPR001487 Bromodomain PRINTS 144 157
IPR001487 Bromodomain PRINTS 194 213
IPR001487 Bromodomain PRINTS 160 176
IPR036427 Bromodomain-like_sf SUPERFAMILY 112 234
IPR037377 GTE_bromo CDD 129 227
IPR038336 NET_sf Gene3D 293 373

No CAZYmes available for this sequence

No external refs found!