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  5. Zm00001d008932_T001

Zm00001d008932_T001


Description : transducin family protein / WD-40 repeat family protein


Gene families : OG_01_0002824 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002824_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d008932_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d008932_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_255
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_250


Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 2 305
IPR001680 WD40_rpt ProSiteProfiles 182 204
IPR037363 Sec13/Seh1_fam PANTHER 4 304
IPR001680 WD40_rpt ProSiteProfiles 209 244
IPR020472 G-protein_beta_WD-40_rep PRINTS 72 86
IPR020472 G-protein_beta_WD-40_rep PRINTS 232 246
IPR020472 G-protein_beta_WD-40_rep PRINTS 182 196
IPR001680 WD40_rpt SMART 92 133
IPR001680 WD40_rpt SMART 202 245
IPR001680 WD40_rpt SMART 2 39
IPR001680 WD40_rpt SMART 139 195
IPR001680 WD40_rpt SMART 44 85
IPR001680 WD40_rpt SMART 254 290
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 6 290
IPR001680 WD40_rpt ProSiteProfiles 7 37
IPR001680 WD40_rpt ProSiteProfiles 51 85
IPR001680 WD40_rpt Pfam 46 84
IPR001680 WD40_rpt Pfam 95 132
IPR001680 WD40_rpt Pfam 164 194
IPR001680 WD40_rpt Pfam 8 37
IPR001680 WD40_rpt Pfam 209 244
IPR001680 WD40_rpt Pfam 94 132
IPR001680 WD40_rpt Pfam 46 85
IPR001680 WD40_rpt Pfam 209 244
IPR001680 WD40_rpt Pfam 8 37
IPR001680 WD40_rpt Pfam 146 195
IPR037363 Sec13/Seh1_fam PANTHER 1 298
IPR001680 WD40_rpt ProSiteProfiles 51 85
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 2 305
IPR001680 WD40_rpt SMART 92 133
IPR001680 WD40_rpt SMART 202 245
IPR001680 WD40_rpt SMART 2 39
IPR001680 WD40_rpt SMART 139 195
IPR001680 WD40_rpt SMART 44 85
IPR001680 WD40_rpt SMART 254 290
IPR001680 WD40_rpt ProSiteProfiles 7 37
IPR001680 WD40_rpt ProSiteProfiles 182 204
IPR001680 WD40_rpt ProSiteProfiles 209 244
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 6 290
IPR020472 G-protein_beta_WD-40_rep PRINTS 72 86
IPR020472 G-protein_beta_WD-40_rep PRINTS 232 246
IPR020472 G-protein_beta_WD-40_rep PRINTS 182 196

No CAZYmes available for this sequence

No external refs found!